Paleoceanography

2022

Devendra, D., Łącka, M., Telesiński, M. M., Rasmussen, T. L., Sztybor, K., Zajączkowski, M. Paleoceanography of the Northwestern Greenland Sea and Return Atlantic Current evolution, 35–4 kyr BP. Global and Planetary Change, 2022, 103947. https://doi.org/10.1016/j.gloplacha.2022.103947
Telesiński M., Łącka M., Kujawa A., Zajączkowski M. The significance of Atlantic Water routing in the Nordic Seas: the Holocene perspective. 2022. The Holocene, 32(10), 1104–1116. https://doi.org/10.1177/09596836221106974
Nguyen, N.-L., Pawłowska, J., Angeles, I. B., Zajaczkowski, M., Pawłowski, J. Metabarcoding reveals high diversity of benthic foraminifera linked to water masses circulation at coastal Svalbard. Geobiology, 2022, 00, 1– 18. https://doi.org/10.1111/gbi.12530
Greco, M., Werner, K., Zamelczyk, K., Rasmussen, T. L., Kucera, M. Decadal trend of plankton community change and habitat shoaling in the Arctic gateway recorded by planktonic foraminifera.2022. Global change biology, 28(5), 1798-1808. https://doi.org/10.1111/gcb.16037
Szymczak-Żyła, M., & Lubecki, L. Biogenic and anthropogenic sources of sedimentary organic matter in marine coastal areas: A multi-proxy approach based on bulk and molecular markers. Marine Chemistry, 2022, 239, 104069. https://doi.org/10.1016/j.marchem.2021.104069
Pawłowski, J., Bruced., K. Panksepefg, K., Aguirreh F.I., Amafitanoh, S., Apothéloz-Perret-Gentil. L., Baussanti, T., Bouchez A., Carugatik, L., Cermakova K., Cordieral T., Corinaldesim C., Costano, F.O., Danovarok, R., Dell'Annok, A., Duarteno, S., Eisendle U., Ferrariq B.J.D., Fazih, S. Environmental DNA metabarcoding for benthic monitoring: A review of sediment sampling and DNA extraction methods. Sci Total Environ, 2022, 818:151783doi.org/10.1016/j.scitotenv.2021.151783
Greco M., Lejzerowicz F, Reo E., Caruso A., Maccotta A., Coccioni J., Pawlowski J, Frontalini F.. Environmental RNA outperforms eDNA metabarcoding in assessing impact of marine pollution: A chromium-spiked mesocosm test. 2022. Chemosphere, 298, 134239, https://doi.org/10.1016/j.chemosphere.2022.134239.
Melaniuk K., Sztybor K., Treude T., Sommer S., Zajączkowski M., Rasmussen T. L. Response of benthic foraminifera to environmental successions of cold seeps from Vestnesa Ridge, Svalbard: Implications for interpretations of paleo-seepage environments. Front. Mar. Sci.2022. 9:999902. doi: 10.3389/fmars.2022.999902
de Garidel-Thoron, T., Chaabane, S., Giraud, X., Meilland, J., Jonkers, L., Kucera, M., ... Greco, M,, Schiebel, R. The Foraminiferal Response to Climate Stressors Project: Tracking the Community Response of Planktonic Foraminifera to Historical Climate Change. 2022. Front. Mar. Sci., 9, 827962. https://doi.org/10.3389/fmars.2022.827962
Cordier, T., Angeles, I. B., Henry, N., Lejzerowicz, F., Berney, C., Morard, R., ... & Pawlowski, J. Patterns of eukaryotic diversity from the surface to the deep-ocean sediment. Science Advances, 2022, 8(5), 1-14. https://www.science.org/doi/10.1126/sciadv.abj9309
Gooday, A.J., Holzmann, M., Majewski, W., Pawlowski J., et al. New species of Gromia (Protista, Rhizaria) from South Georgia and the Falkland Islands. Polar Biol. 2022, 45, 647–666. https://doi.org/10.1007/s00300-022-03017-4
Sierra R., Mauffrey F, Cruz J., Holzmann M., Gooday A.J., Maurer-Alcalá X., Thakur R., Greco M., Weiner A.K.M, Katz L.A., Pawlowski J. Taxon-rich transcriptomics supports higher-level phylogeny and major evolutionary trends in Foraminifera. 2022. Molecular Phylogenetics and Evolution, 174:107546. doi: 10.1016/j.ympev.2022.107546.
Avnaim-Katav, S., Holzmann, M., & Pawlowski, J. Carterina labinea sp. nov.–a new alien foraminifer from the southeastern mediterranean shelf. 2022. European Journal of Protistology, 85:125911. doi: 10.1016/j.ejop.2022.125911
Al-Enezi E, Francescangeli F, Balassi E, Borderie S, Al-Hazeem S, Al-Salameen F, Boota Anwar A, Pawlowski J, Frontalini F. Benthic foraminifera as proxies for the environmental quality assessment of the Kuwait Bay (Kuwait, Arabian Gulf): Morphological and metabarcoding approaches.2022. Sci Total Environ, 10;833:155093. doi: 10.1016/j.scitotenv.2022.155093.
Morard, R., Hassenrück, Ch., Greco, M., Fernandez-Guerra, A., Rigaud, S., Douady, Ch.J., Kucera, M. Renewal of planktonic foraminifera diversity after the Cretaceous Paleogene mass extinction by benthic colonizers. Nature Communication, 2022, 13:7135. https://doi.org/10.1038/s41467
Le JT, Levin LA, Lejzerowicz F, Cordier T, Gooday AJ, Pawlowski J. Scientific and budgetary trade-offs between morphological and molecular methods for deep-sea biodiversity assessment. 2022. Integr Environ Assess Manag 18(3):655-663. doi: 10.1002/ieam.4466.
Macher JN, Bloska DM, Holzmann M, Girard EB, Pawlowski J, Renema W. Mitochondrial cytochrome c oxidase subunit I (COI) metabarcoding of Foraminifera communities using taxon-specific primers. PeerJ. 2022 Sep 5;10:e13952. doi: 10.7717/peerj.13952.
Holzmann M, Gooday AJ, Majewski W, Pawlowski J. Molecular and morphological diversity of monothalamous foraminifera from South Georgia and the Falkland Islands: Description of four new species. Eur J Protistol. 2022 Aug;85:125909. doi: 10.1016/j.ejop.2022.125909.
Holzmann M, Hohenegger J, Apothéloz-Perret-Gentil L, Morard R, Abramovich S, Titelboim D, Pawlowski J. Operculina and Neoassilina: A Revision of Recent Nummulitid Genera Based on Molecular and Morphological Data Reveals a New Genus. 2022. Journal of Earth Science: 1–14. https://doi.org/10.1007/s12583-021-1595-8
Charvoz L, Apothéloz-Perret-Gentil L, Reo E, Thiébaud J, Pawlowski J.. Monitoring newt communities in urban area using eDNA metabarcoding. PeerJ 2021 9:e12357 https:">https://doi.org/10.7717/peerj.12357
Telesiński M., Łącka M., Kujawa A., Zajączkowski M. (2022) The significance of Atlantic Water routing in the Nordic Seas: the Holocene perspective. The Holocene. https://doi.org/10.1177/09596836221106974
Szymczak-Żyła, M., & Lubecki, L. (2022). Biogenic and anthropogenic sources of sedimentary organic matter in marine coastal areas: A multi-proxy approach based on bulk and molecular markers. Marine Chemistry, 239, 104069. https://doi.org/10.1016/j.marchem.2021.104069
Greco, M. Werner, K., Zamelczyk, K., Rasmussen, T. L., & Kucera, M. (2022). Decadal trend of plankton community change and habitat shoaling in the Arctic gateway recorded by planktonic foraminifera. Global Change Biology, 28(5), 1798-1808. https://doi.org/10.1111/gcb.16037
Greco, M. Franck Lejzerowicz, Emanuela Reo, Antonio Caruso, Antonella Maccotta, Rodolfo Coccioni, Jan Pawlowski, Fabrizio Frontalini. (2022) Environmental RNA outperforms eDNA metabarcoding in assessing impact of marine pollution: A chromium-spiked mesocosm test, Chemosphere, Volume 298, 134239, https://doi.org/10.1016/j.chemosphere.2022.134239
Pawłowski, J., Bruced., K. Panksepefg, K., Aguirreh F.I., Amafitanoh, S., Apothéloz-Perret-Gentil. L., Baussanti, T., Bouchez A., Carugatik, L., Cermakova K., Cordieral T., Corinaldesim C., Costano, F.O., Danovarok, R., Dell'Annok, A., Duarteno, S., Eisendle U., Ferrariq B.J.D., … Fazih, S. (2022). Environmental DNA metabarcoding for benthic monitoring: A review of sediment sampling and DNA extraction methods. https://doi.org/10.1016/j.scitotenv.2021.151783
de Garidel-Thoron, T., Chaabane, S., Giraud, X., Meilland, J., Jonkers, L., Kucera, M., ... Mattia Greco & Schiebel, R. (2022). The Foraminiferal Response to Climate Stressors Project: Tracking the Community Response of Planktonic Foraminifera to Historical Climate Change. Front. Mar. Sci, 9, 827962. https://doi.org/10.3389/fmars.2022.827962
Bruce K, Blackman R, Bourlat SJ, Hellström AM, Bakker J, Bista I, Bohmann K, Bouchez A, Brys R, Clark K, Elbrecht V, Fazi S, Fonseca V, Hänfling B, Leese F, Mächler E, Mahon AR, Meissner K, Panksep K, Pawlowski J, Schmidt Yáñez P, Seymour M, Thalinger B, Valentini A, Woodcock P, Traugott M, Vasselon V, Deiner K (2022) A practical guide to DNA-based methods for biodiversity assessment. Advanced Books. https://doi.org/10.3897/ab.e68634
Cordier, T., Angeles, I. B., Henry, N., Lejzerowicz, F., Berney, C., Morard, R., ... & Pawlowski, J. (2022). Patterns of eukaryotic diversity from the surface to the deep-ocean sediment. Science Advances, 8(5), eabj9309. https://doi.org/10.1126/sciadv.abj9309
Gooday, A.J., Holzmann, M., Majewski, W., Pawłowski, J. et al. (2022) New species of Gromia (Protista, Rhizaria) from South Georgia and the Falkland Islands. Polar Biology. https://doi.org/10.1007/s00300-022-03017-4
Roberto Sierra, Florian Mauffrey, Joana Cruz, Maria Holzmann, Andrew J. Gooday, Xyrus Maurer-Alcalá, Rabindra Thakur, Mattia Greco, Agnes K.M. Weiner, Laura A. Katz, Jan Pawlowski. (2022) Taxon-rich transcriptomics supports higher-level phylogeny and major evolutionary trends in Foraminifera, Molecular Phylogenetics and Evolution, 107546, ISSN 1055-7903, https://doi.org/10.1016/j.ympev.2022.107546.

2021

Szymańska, N., Łącka, M., Koziorowska‐Makuch, K., Kuliński, K., Pawłowska, J., Kujawa, A., ... & Zajączkowski, M. (2021). Foraminifera-derived carbon contribution to sedimentary inorganic carbon pool: A case study from three Norwegian fjords. Geobiology, 00, 1– 11. https://doi.org/10.1111/gbi.12460
Kujawa, A., Łącka, M., Szymańska, N., Pawłowska, J., Telesiński, M., Zajączkowski, M. (2021) Could Norwegian fjords serve as an analogue for the future of the Svalbard fjords? State and fate of high latitude fjords in the face of progressive “atlantification”. Polar Biology. https://doi.org/10.1007/s00300-021-02951-z
Telesiński, M. M., Ezat, M. M., Muschitiello, F., Bauch, H. A., & Spielhagen, R. F. (2021). Ventilation History of the Nordic Seas Deduced from Pelagic‐Benthic Radiocarbon Age Offsets. Geochemistry, Geophysics, Geosystems, 22, e2020GC009132. https://doi.org/10.1029/2020GC009132
Weydmann-Zwolicka, A., Prątnicka, P., Łącka, M., Majaneva, S., Cottier, F., & Berge, J. (2021). Zooplankton and sediment flux in two contrasting fjords reveal Atlantification of the Arctic. Science of The Total Environment, 145599. https://doi.org/10.1016/j.scitotenv.2021.145599
Pawlowski, J., Laure Apothéloz-Perret-Gentil, Florian Altermatt. (2021) Environmental versus extra-organismal DNA. Authorea. June 03. https://doi.org/10.22541/au.162269198.80398172/v1
Pawlowski, J., Bonin, A., Boyer, F., Cordier, T., & Taberlet, P. (2021). Environmental DNA for biomonitoring. Molecular Ecology, 00, 1– 6. https://doi.org/10.1111/mec.16023
Hänninen, J., Weckström, M., Pawłowska, J., Szymańska, N., Uurasjärvi, E., Zajaczkowski, M., ... & Vuorinen, I. (2021). Plastic debris composition and concentration in the Arctic Ocean, the North Sea and the Baltic Sea. Marine Pollution Bulletin, 165, 112150. https://doi.org/10.1016/j.marpolbul.2021.112150
Sagova-Mareckova, J. Boenigk, A. Bouchez, K. Cermakova, T. Chonova, T. Cordier, U. Eisendle, T. Elersek, S. Fazi, T. Fleituch, L. Frühe, M. Gajdosova, N. Graupner, A. Haegerbaeumer, A.-M. Kelly, J. Kopecky, F. Leese, P. Nõges, S. Orlic, K. Panksep, J. Pawlowski, A. Petrusek, J.J. Piggott, J.C. Rusch, R. Salis, J. Schenk, K. Simek, A. Stovicek, D.A. Strand, M.I. Vasquez, T. Vrålstad, S. Zlatkovic, M. Zupancic, T. Stoeck (2021). Expanding ecological assessment by integrating microorganisms into routine freshwater biomonitoring. Water Research, 116767. https://doi.org/10.1016/j.watres.2020.116767
Rodrigues, A. R., Pellizari, V. H., de Salles Almeida, C., de Sousa, E. C. P., Holzmann, M., & Pawlowski, J.. (2021). New phylotypes of foraminifera in subtropical Brazilian coastal waters revealed by environmental DNA metabarcoding. Journal of Sedimentary Environments, 1-11. https://doi.org/10.1007/s43217-021-00049-4
Rimet F, Aylagas E, Borja A, Bouchez A, Canino A, Chauvin C, Chonova T, Ciampor Jr F, Costa FO, Ferrari BJD, Gastineau R, Goulon C, Gugger M, Holzmann M, Jahn R, Kahlert M, Kusber W-H, Laplace-Treyture C, Leese F, Leliaert F, Mann DG, Marchand F, Méléder V, Pawlowski J, Rasconi S, Rivera S, Rougerie R, Schweizer M, Trobajo R, Vasselon V, Vivien R, Weigand A, Witkowski A, Zimmermann J, Ekrem T (2021) Metadata standards and practical guidelines for specimen and DNA curation when building barcode reference libraries for aquatic life. Metabarcoding and Metagenomics 5: e58056. https://doi.org/10.3897/mbmg.5.58056
Kudryavtsev, A., Völcker, E., Clauss, S., & Pawlowski, J.. (2021). Ovalopodium rosalinum sp. nov., Planopodium haveli gen. nov, sp. nov., Planopodium desertum comb. nov. and new insights into phylogeny of the deeply branching members of the order Himatismenida (Amoebozoa). International Journal of Systematic and Evolutionary Microbiology. https://doi.org/10.1099/ijsem.0.004737
Gooday, A. J., Holzmann, M., Goetz, E., Cedhagen, T., Korsun, S., & Pawlowski, J.. (2021). Three new species of Gromia (Protista, Rhizaria) from western Greenland fjords. Polar Biology, 1-17. https://doi.org/10.1007/s00300-021-02858-9
Hayward, Bruce W., Maria Holzmann, Jan Pawlowski, Justin H. Parker, Tushar Kaushik, Makoto S. Toyofuku, and Masashi Tsuchiya. (2021) Molecular and morphological taxonomy of living Ammonia and related taxa (Foraminifera) and their biogeography. Micropaleontology. Volume 67, No. 2-3 pp. 109-274.
Le, J.T., Levin, L.A., Lejzerowicz, F., Cordier, T., Gooday, A.J. and Pawlowski, J.. (2021), Scientific and budgetary tradeoffs between morphological and molecular methods for deep-sea biodiversity assessment. Integr Environ Assess Manag. Accepted Author Manuscript. https://doi.org/10.1002/ieam.4466
Lejzerowicz, F., Gooday, A. J., Barrenechea Angeles, I., Cordier, T., Morard, R., Laure, A. P. G., ... & Pawlowski, J.. (2021). Eukaryotic biodiversity and spatial patterns in the Clarion-Clipperton Zone and other abyssal regions: insights from sediment DNA and RNA metabarcoding. Frontiers in Marine Science, 8, 536. https://doi.org/10.3389/fmars.2021.671033
Gooday AJ, Lejzerowicz F, Goineau A, Holzmann M, Kamenskaya O, Kitazato H, Lim S-C, Pawlowski J, Radziejewska T, Stachowska Z and Wawrzyniak-Wydrowska B (2021) The Biodiversity and Distribution of Abyssal Benthic Foraminifera and Their Possible Ecological Roles: A Synthesis Across the Clarion-Clipperton Zone. Front. Mar. Sci. 8:634726. https://doi.org/10.3389/fmars.2021.634726
Majewski, W., Holzmann, M., Gooday, A. J., Majda, A., Mamos, T., & Pawlowski, J.. (2021). Cenozoic climatic changes drive evolution and dispersal of coastal benthic foraminifera in the Southern Ocean. Scientific Reports, 11(1), 1-18. https://doi.org/10.1038/s41598-021-99155-6
Holzmann, M., Gooday, A.J., Siemensma, F., Pawlowski, J.. (2021) Review: Freshwater and Soil Foraminifera – A Story of Long-Forgotten Relatives. Journal of Foraminiferal Research 2021;; 51 (4): 318–331. doi: https://doi.org/10.2113/gsjfr.51.4.318
Charvoz L, Apothéloz-Perret-Gentil L, Reo E, Thiébaud J, Pawlowski J. (2021). Monitoring newt communities in urban area using eDNA metabarcoding. PeerJ 9:e12357 https://doi.org/10.7717/peerj.12357

2020

Krajewska, M., Szymczak-Żyła, M., Tylmann, W., & Kowalewska, G. (2020). Climate change impact on primary production and phytoplankton taxonomy in Western Spitsbergen fjords based on pigments in sediments. Global and Planetary Change, 189, 103158. https://doi.org/10.1016/j.gloplacha.2020.103158
Łącka M., Michalska D., Pawłowska J., Szymańska N., Szczucinski W., Forwick M., Zajączkowski M. (2020). Multiproxy paleoceanographic study from the western Barents Sea reveals dramatic Younger Dryas onset followed by oscillatory warming trend Scientific Reports 10, 15667. https://doi.org/10.1038/s41598-020-72747-4
Pawłowska J., Wollenburg J., Zajączkowski M., Pawłowski J. (2020). Planktonic foraminifera genomic variations reflect paleoceanographic changes in the Arctic: evidence from sedimentary ancient DNA. Scientific Reports 10, 15102. https://doi.org/10.1038/s41598-020-72146-9
Telesiński M., Szymańska N., Pawłowska J., Zajączkowski M. (2020). Does foraminiferal test size reflect changes in palaeoenvironmental conditions?—a case study from the southern Svalbard shelf. Polar Research, 39, 3624. http://dx.doi.org/10.33265/polar.v39.3624
Pawłowska J., Łącka, M., Kucharska, M., Pawłowski, J., and Zajączkowski, M. (2020). Multiproxy evidence of the Neoglacial expansion of Atlantic Water to eastern Svalbard: Does ancient environmental DNA complement sedimentary and microfossil records? Climate of the Past 16, 487–501. https://doi.org/10.5194/cp-16-487-2020
Pawłowska J., Pawłowski J., Zajączkowski M. (2020). Dataset of foraminiferal sedimentary DNA (sed DNA) sequences from Svalbard. Data in Brief 30, 105553. https://doi.org/10.1016/j.dib.2020.105553
Pawłowski J., Apothéloz-Perret-Gentil L., Altermatt F. (2020). Environmental DNA: What's behind the term? Clarifying the terminology and recommendations for its future use in biomonitoring. Molecular Ecology 00:1–7. https://doi.org/10.1111/mec.15643
Trudnowska E., Dąbrowska A. M., Bohenke R., Zajączkowski M., Błachowiak-Samołyk K. (2020). Particles, protists, and zooplankton in glacier-influenced coastal Svalbard waters. Estuarine, Coastal and Shelf Sciences 242, 106842. https://doi.org/10.1016/j.ecss.2020.106842
Blackman R.C., Bruder A., Burdon F.J., Convey P., Funk W.Ch., Jähnig S.C., Kishe M.A., Moretti M.S., Pawłowski J., Stubbington R., Zhang X, Seehausen O. Altermatt F. (2020). A meeting framework for inclusive and sustainable science Nature Ecology & Evolution 4, 668–671. https://doi.org/10.1038/s41559-020-1190-x
Cordier T, Alonso-Sáez L, Apothéloz-Perret-Gentil L, Aylagas E., Bohan D.A. Bouchez A., Chariton A., Creer S., Frühe L., Keck F., Keeley N., Laroche O., Leese F., Pochon X., Stoeck T., Pawłowski J., Lanzén A. (2020). Ecosystems monitoring powered by environmental genomics: A review of current strategies with an implementation roadmap. Molecular Ecology 00:1–22. https://doi.org/10.1111/mec.15472
Frontalinia F., Cordierb T., Balassia E., Armynot du Chateletc E., Cermakovad K., Apothéloz-Perret-Gentilbd L., Virginia M., Martinsef A., Buccia C., Scantamburlog E., Tregliah M., Bonamini V., Pawłowski J. (2020). Benthic foraminiferal metabarcoding and morphology-based assessment around three offshore gas platforms: Congruence and complementarity. Environment International 144, 106049 https://doi.org/10.1016/j.envint.2020.106049
Frühe L, Cordier T, Dully V, Breiner HW., Lentendu G., Pawłowski J., Martins C., Wilding T.A.Stoeck T. (2020). Supervised machine learning is superior to indicator value inference in monitoring the environmental impacts of salmon aquaculture using eDNA metabarcodes. Molecular Ecology 00:1–19. https://doi.org/10.1111/mec.15434
Gooday A.J., Durdena J.M., Holzmannd M., Pawłowski J., Smith C. R. (2020). Xenophyophores (Rhizaria, Foraminifera), including four new species and two new genera, from the western Clarion-Clipperton Zone (abyssal equatorial Pacific). European Journal of Protistology 75, 125715. https://doi.org/10.1016/j.ejop.2020.125715
Vivien R., Apothéloz-Perret-Gentil L., Pawłowski J., Werner I., Lafont M., Ferrari B. J. D. (2020). High-throughput DNA barcoding of oligochaetes for abundance-based indices to assess the biological quality of sediments in streams and lakes. Scientific Reports 10:2041. https://doi.org/10.1038/s41598-020-58703-2
Mauffrey, F., Cordier, T., Apothéloz‐Perret‐Gentil, L., Cermakova, K., Merzi, T., Delefosse, M., ... & Pawłowski, J. (2020). Benthic monitoring of oil and gas offshore platforms in the North Sea using environmental DNA metabarcoding. Molecular Ecology,
Apothéloz-Perret-Gentil, L., Bouchez, A., Cordier, T., Cordonier, A., Guéguen, J., Rimet, F., ... & Pawłowski, J. (2020). Monitoring the ecological status of rivers with diatom eDNA metabarcoding: a comparison of taxonomic markers and analytical approaches for the inference of a molecular diatom index. Molecular Ecology, https://doi.org/10.1111/mec.15646
Makiola A, Compson ZG, Baird DJ, Barnes MA, Boerlijst SP, Bouchez A, Brennan G, Bush A, Canard E, Cordier T, Creer S, Curry RA, David P, Dumbrell AJ, Gravel D, Hajibabaei M, Hayden B, van der Hoorn B, Jarne P, Jones JI, Karimi B, Keck F, Kelly M, Knot IE, Krol L, Massol F, Monk WA, Murphy J, Pawłowski J, Poisot T, Porter TM, Randall KC, Ransome E, Ravigné V, Raybould A, Robin S, Schrama M, Schatz B, Tamaddoni-Nezhad A, Trimbos KB, Vacher C, Vasselon V, Wood S, Woodward G and Bohan DA. (2020). Key Questions for Next-Generation Biomonitoring. Front. Environ. Sci. 7:197. doi: 10.3389/fenvs.2019.00197
Siemensma F, Holzmann M, Apothéloz-Perret-Gentil L, Clauß S, Voelcker E, Bettighofer W, Roshan SK, Walden S, Dumack K, Pawłowski J. (2020). Broad sampling of monothalamids (Rhizaria, Foraminifera) gives further insight into diversity of non-marine Foraminifera. Eur J Protistol. 2020 Oct 14:125744. doi: 10.1016/j.ejop.2020.125744.
Ingels J., Ann Vanreusel, Ellen Pape, Francesca Pasotti, Lara Macheriotou, Pedro Martínez Arbizu, Martin Vinther Sørensen, Virginia P. Edgcomb, Jyotsna Sharma, Nuria Sánchez, William B. Homoky, Clare Woulds, Daniel Leduc, Andrew J. Gooday, Jan Pawłowski, John R. Dolan, Michaela Schratzberger, Sabine Gollner, Alexandra Schoenle, Hartmut Arndt & Daniela Zeppilli. (2020). Ecological variables for deep-ocean monitoring must include microbiota and meiofauna for effective conservation. Nature Ecology Evolution. https://doi.org/10.1038/s41559-020-01335-6
Angeles, I. B., Lejzerowicz, F., Cordier, T., Scheplitz, J., Kucera, M., Ariztegui, D., Pawłowski, J. & Morard, R. (2020). Planktonic foraminifera eDNA signature deposited on the seafloor remains preserved after burial in marine sediments. Scientific Reports, https://doi.org/10.1038/s41598-020-77179-8

2019

Łącka, M., Cao, M., Rosell-Melé, A., Pawłowska, J., Kucharska, M., Forwick, M., Zajączkowski, M. (2019). Postglacial paleoceanography of the western Barents Sea: Implications for alkenone-based sea surface temperatures and primary productivity, Quaternary Science Reviews, 224, 105973. https://doi.org/10.1016/j.quascirev.2019.105973
Lubecki, L., & Kowalewska, G. (2019). Plastic-derived contaminants in sediments from the coastal zone of the southern Baltic Sea. Marine Pollution Bulletin, 146, 255-262. https://doi.org/10.1016/j.marpolbul.2019.06.030
Kucharska, M., Kujawa, A., Pawłowska, J., Łącka, M., Szymańska, N., Lønne, O. J., & Zajączkowski, M. (2019). Seasonal changes in foraminiferal assemblages along environmental gradients in Adventfjorden (West Spitsbergen). Polar Biology, 42(3), 569-580. https://doi.org/10.1007/s00300-018-02453-5
Szymczak-Żyła, M., Krajewska, M., Witak, M., Ciesielski, T. M., Ardelan, M. V., Jenssen, B. M., Goslar, T., Winogradow, A., Filipkowska, A., Lubecki, L., Zamojska, A. & Kowalewska, G. (2019). Present and past‐millennial eutrophication in the Gulf of Gdańsk (southern Baltic Sea). Paleoceanography and Paleoclimatology, 34(2), 136-152. https://doi.org/10.1029/2018PA003474
Krajewska, M., Szymczak-Żyła, M., Kobos, J., Witak, M., & Kowalewska, G. (2019). Canthaxanthin in recent sediments as an indicator of heterocystous cyanobacteria in coastal waters. Oceanologia, 61(1), 78-88. https://doi.org/10.1016/j.oceano.2018.07.002
Lubecki, L., Oen, A. M., Breedveld, G. D., & Zamojska, A. (2019). Vertical profiles of sedimentary polycyclic aromatic hydrocarbons and black carbon in the Gulf of Gdańsk (Poland) and Oslofjord/Drammensfjord (Norway), and their relation to regional energy transitions. Science of The Total Environment, 646, 336-346. https://doi.org/10.1016/j.scitotenv.2018.07.300
Filipkowska, A., & Kowalewska, G. (2019). Butyltins in sediments from the Southern Baltic coastal zone: Is it still a matter of concern, 10 years after implementation of the total ban?. Marine pollution bulletin, 146, 343-348. https://doi.org/10.1016/j.marpolbul.2019.06.050
Pawłowska, J., Łącka, M., Kucharska, M., Pawłowski, J., Zajączkowski, M. (2019). Multiproxy evidence of the Neoglacial expansion of Atlantic Water to eastern Svalbard: Does ancient environmental DNA complement sedimentary and microfossil records? Climate of the Past Discussion. https://doi.org/10.5194/cp-2019-21
Luoto T.P., Ojala A.E.K., Zajączkowski, M., (2019), Proxy-based 300-year High Arctic climate warming record from Svalbard, Polar Record, 55 (3), 132-141. 10.1017/S0032247419000275

2018

Telesiński, M.M., Przytarska, J.E., Sternal, B., Forwick, M., Szczuciński, W., Łącka, M., Zajączkowski, M. (2018). Palaeoceanographic evolution of the SW Svalbard shelf over the last 14 000 years. Boreas, 410-422. https://doi.org/10.1111/bor.12282.
Telesiński, M. M., Bauch, H. A., & Spielhagen, R. F. (2018). Causes and consequences of Arctic freshwater routing into the Nordic Seas during late Marine Isotope Stage 5. Journal of Quaternary Science, 33(7), 794-803. https://doi.org/10.1002/jqs.3060
Filipkowska, A., Lubecki, L., Szymczak-Żyła, M., Ciesielski, T. M., Jenssen, B. M., Ardelan, M. V., ... & Kowalewska, G. (2018). Anthropogenic impact on marine ecosystem health: A comparative multi-proxy investigation of recent sediments in coastal waters. Marine Pollution Bulletin, 133, 328-335. https://doi.org/10.1016/j.marpolbul.2018.05.058
Szymczak-Żyła, M. (2018). CPPB-aE (132,173-cyclopheophorbide-a enol) in sediments–A potential proxy of oxygen deficiency in near-bottom water. Organic Geochemistry, 115, 166-173. https://doi.org/10.1016/j.orggeochem.2017.10.011
Luoto, T. P., Ojala A. E. K., Arppe, L., Brooks, S. J., Kurki, E., Oksman, M., Wooller M. J., Zajączkowski, M. (2018). Synchronized proxy-based temperature reconstructions reveal mid- to late Holocene climate oscillations in High Arctic Svalbard. Journal of Quaternary Science. https://doi.org/10.1002/jqs.3001
Van Nieuwenhove, N, Potvin, E., Heikkilä, M., Pospelova, V., Mertens, K.N., Masure, E., Kucharska, M., Yang, E. J., Chomérat, N., Zajączkowski, M. 2018. Taxonomic revision of Spiniferites elongatus (the resting stage of Gonyaulax elongata) based on morphological and molecular analyses. Palynology 42 (S1): 111–134. https://doi.org/10.1080/01916122.2018.1465736
Cegłowska, M., Toruńska-Sitarz, A., Kowalewska, G., & Mazur-Marzec, H. (2018). Specific chemical and genetic markers revealed a thousands-year presence of toxic Nodularia spumigena in the Baltic Sea. Marine Drugs, 16(4), 116. https://dx.doi.org/10.3390%2Fmd16040116

2017

Pawłowska J., Zajączkowski M., Szczuciński W., Zaborska A., Kucharska M., Jernas P.E., Forwick M. (2017). The influence of Coriolis force driven circulation on the palaeoenvironment of Hornsund (S Spitsbergen) over the last century. Boreas, 46, pp. 737–749. https://doi.org/10.1111/bor.12249
Szymczak-Żyła, M., Krajewska, M., Winogradow, A., Zaborska, A., Breedveld, G. D., & Kowalewska, G. (2017). Tracking trends in eutrophication based on pigments in recent coastal sediments. Oceanologia, 59(1), 1-17. https://doi.org/10.1016/j.oceano.2016.08.003
Szymańska N., Pawłowska J., Kucharska M., Kujawa A., Łącka M., Zajączkowski M. (2017). Impact of Shelf Transformed Water (STW) on foraminiferal assemblages in the glacial and outwash fjords of Adventfjorden and Hornsund, Svalbard. Oceanologia, 59, 525-540. https://doi.org/10.1016/j.oceano.2017.04.006
Krajewska, M., Szymczak-Żyła, M., & Kowalewska, G. (2017). Algal pigments in Hornsund (Svalbard) sediments as biomarkers of Arctic productivity and environmental conditions. Polish Polar Research, 423-443. https://doi.org/10.1515/popore-2017-0025
Pawłowska J., Łącka M., Kucharska M., Szymańska N., Koziorowska K., Kuliński K., Zajączkowski M. (2017). Benthic foraminifera contribution to fjord modern carbon pools: A seasonal study in Adventfjorden, Spitsbergen. Geobiology 15: 704–714. https://doi.org/10.1111/gbi.12242
Krajewska, M., Szymczak-Żyła, M., & Kowalewska, G. (2017). Carotenoid determination in recent marine sediments-practical problems during sample preparation and HPLC analysis. Current Chemistry Letters, 6(3), 91-104. https://doi.org/10.5267/j.ccl.2017.4.003
Arppe, L.M., Kurki, E., Wooller, M., Luoto, T., Zajączkowski, M., Ojala, A. (2017). A 5500-year oxygen isotope record of high arctic environmental change from southern Spitsbergen. The Holocene, 27(12), 1948-1962. http://dx.doi.org/10.1177/0959683617715698.

2016

Pawłowska J., Zajączkowski M., Łącka M., Lejzerowicz F., Esling P., Pawłowski J. (2016). Palaeoceanographic changes in Hornsund Fjord (Spitsbergen, Svalbard) over the last millennium: new insight from ancient DNA. Climate of the Past 12:1459-1472. https://doi.org/10.5194/cp-12-1459-2016
Filipkowska, A., Złoch, I., Wawrzyniak-Wydrowska, B., & Kowalewska, G. (2016). Organotins in fish muscle and liver from the Polish coast of the Baltic Sea: Is the total ban successful?. Marine Pollution Bulletin, 111(1-2), 493-499. https://doi.org/10.1016/j.marpolbul.2016.06.052
Łącka, M. and Zajączkowski, M. (2016). Does the recent pool of benthic foraminiferal tests in fjordic surface sediments reflect interannual environmental changes? The resolution limit of the foraminiferal record. Annales Societatis Geologorum Poloniae 86: 59-71. https://doi.org/10.14241/asgp.2015.019
Szymczak-Żyła, M. (2016). Analysis of chloropigments in marine sediments using accelerated solvent extraction (ASE). Limnology and Oceanography: Methods, 14(7), 477-489. https://doi.org/10.1002/lom3.10106
Filipkowska, A., & Lubecki, L. (2016). Endocrine disruptors in blue mussels and sediments from the Gulf of Gdańsk (Southern Baltic). Environmental Science and Pollution Research, 23(14), 13864-13876. https://doi.org/10.1007/s11356-016-6524-5
Szczuciński W., Pawłowska J., Lejzerowicz F., Nishimura Y., Kokociński M., Majewski W., Nakamura Y., Pawłowski J. (2016). Ancient DNA reveals past tsunami deposits. Marine Geology 381: 29-33. https://doi.org/10.1016/j.margeo.2016.08.006
Ojala A.E.K., Arppe L., Luoto T., Wacker L., Kurki E., Zajączkowski M., Pawłowska J., Damrat M., Oksman M. (2016). Sedimentary environment, litostratigraphy and dating of sediment sequences from Arctic lakes Revvatnet and Svartvatnet in Hornsund, Svalbard. Polish Polar Research 37(1):23-48.
Urbanski, J.A., Wochna, A., Bubak, I., Grzybowski, W., Lukawska-Matuszewska, K., Łącka, M., Śliwińska, S., Wojtasiewicz, B., Zajączkowski, M. (2016). Application of Landsat 8 imagery to regional-scale assessment of lake water quality. International Journal of Applied Earth Observation and Geoinformation 51: 28-36.
Drewnik, A., Węsławski, J.M., Włodarska-Kowalczuk, M., Łącka, M., Promińska, A., Zaborska, A. 2016. From the worm’s point of view. I: Environmental settings of benthic ecosystems in Arctic fjord (Hornsund, Spitsbergen). Polar Biology 39: 1411-1424.

2015

Łącka, M., Zajączkowski, M., Forwick, M., Szczuciński, W. (2015). Late Weichselian and Holocene paleoceanography of Storfjordrenna, southern Svalbard. Climate of the Past 11: 587–603. https://doi.org/10.5194/cp-11-587-2015
Wegner C., Bennett K.E., de Vernal A., Forwick M., Fritz M., Heikkilä M., Łącka M., Lantuit H., Laska M., Moskalik M., O’Regan M., Pawłowska J., Promińska A., Rachold V., Vonk J.E., Werner. (2015). Variability in transport of terrigenous material on the shelves and the deep Arctic Ocean during the Holocene. Polar Research 34: 24964. https://doi.org/10.3402/polar.v%v.24964
Łącka, M., Pawłowska, J., Zajączowski, M. (2015). New methods in reconstruction of the Arctic marine paleoenvironments. In: Zieliński T., Węsławski J., Kuliński K. (eds.) Impact of climate changes on marine environments, Springer Series: GeoPlanet: Earth and Planetary Sciences, p. 127-148. https://doi.org/10.1007/978-3-319-14283-8_10
Iglikowska A., Pawłowska J. (2015). The adaptations of the Foraminifera and Ostracoda to fresh water colonization. In: Zieliński T., Węsławski J., Kuliński K. (eds.) Impact of climate changes on marine environments, Springer Series: GeoPlanet: Earth and Planetary Sciences, p. 91-113.
Włodarska-Kowalczuk, M., Mazurkiewicz, M., Jankowska, E., Kotwicki, L., Damrat, M., Zajączkowski M. (2016). Effects of fluvial discharges on meiobenthic and macrobenthic variability in the Vistula River prodelta (Baltic Sea). Journal of Marine Systems 157: 135-146.

2014

Pawłowska, J., Lejzerowicz, F., Esling, P., Szczuciński, W., Zajączkowski, M., Pawłowski, J. (2014). Ancient DNA sheds new light on the Svalbard fossil foraminiferal record from the last millenium. Geobiology 12: 277-288. https://doi.org/10.1111/gbi.12087
Lubecki, L. (2014). Determination of 4-nonylphenols in sediments from a eutrophic marine area. International Journal of Environmental Analytical Chemistry, 94(14-15), 1360-1374. https://doi.org/10.1080/03067319.2014.940344
Kowalewska, G., Lubecki, L., Szymczak-Żyła, M., Bucholc, K., Filipkowska, A., Gogacz, R., & Zamojska, A. (2014). Eutrophication monitoring system near the Sopot beach (southern Baltic). Ocean & Coastal Management, 98, 51-61. https://doi.org/10.1016/j.ocecoaman.2014.06.007
Bucholc, K., Szymczak-Żyła, M., Lubecki, L., Zamojska, A., Hapter, P., Tjernström, E., & Kowalewska, G. (2014). Nutrient content in macrophyta collected from southern Baltic Sea beaches in relation to eutrophication and biogas production. Science of the Total Environment, 473, 298-307. https://doi.org/10.1016/j.scitotenv.2013.12.044
Filipkowska, A., Kowalewska, G., & Pavoni, B. (2014). Organotin compounds in surface sediments of the Southern Baltic coastal zone: a study on the main factors for their accumulation and degradation. Environmental Science and Pollution Research, 21(3), 2077-2087. https://doi.org/10.1007/s11356-013-2115-x
Sternal, B., Szczuciński, W., Forwick, W., Zajączkowski, M., Lorenc, S., Przytarska, J. (2014). Postglacial variability in near-bottom current speed on the continental shelf off south-west Spitsbergen. Journal of Quaternary Science 29(8): 767–777. https://doi.org/10.1002/jqs.2748
Włodarska-Kowalczuk M., Balazy P., Kobos J., Wiktor, Zajączkowski M., Moskal W. 2014. Large red cyanobacterial mats (Spirulina subsalsa Oersted ex Gomont) in the shallow sublittoral of the southern Baltic. Oceanologia 56(3): 661-666.

2013

Filipkowska, A. (2013). Determining PCBs in Fish and Sediment Samples Related to Intercomparison Studies. Polish Journal of Environmental Studies, 22(5).
Damrat, M., Zaborska, A., Zajączkowski M. (2013). Sedimentation from suspension and sediment accumulation rate in the Vistula River prodelta, Gulf of Gdańsk (Baltic Sea). Oceanologia 55(4): 937-950.
Włodarska-Kowalczuk M., Pawłowska J., Zajączkowski M. (2013). Do Foraminifera mirror patterns of diversity and distribution of macrobenthic fauna in an Arctic glacial fjord? Marine Micropaleontology 103: 30-39.
Kuklinski, P., Berge, J., McFadden, L., Dmoch, K., Zajączkowski M., Nygard, H., Piwosz, K., Tatarek, A. (2013). Seasonality of occurrence and recruitment of Arctic marine benthic invertebrate larvae in relation to environmental variables. Polar Biology 36: 549-560.

2012

Lubecki, L., & Kowalewska, G. (2012). Suspended PM 10 Particles in an Urbanized Coastal Zone (Tricity Agglomeration, Poland)-a Possible Source of PAHs for Gulf of Gdańsk Sediments. Polish Journal of Environmental Studies, 21(3).
Szczuciński, W. and Zajączkowski, M. (2012). Factors controlling downward fluxes of particulate matter in glacier-contact and non-glacier contact settings in a subpolar fjord (Billefjorden, Svalbard). In: Li M., Sherwood C., Hill P. (eds): Sediments, Morphology and Sedimentary Processes on Continental Shelves. IAS Special Publication, Wiley-Blackwell Publishing. 44: 369-386.
Pfannkuche, J., Lubecki, L., Schmidt, H., Kowalewska, G., & Kronfeldt, H. D. (2012). The use of surface-enhanced Raman scattering (SERS) for detection of PAHs in the Gulf of Gdańsk (Baltic Sea). Marine Pollution Bulletin, 64(3), 614-626. https://doi.org/10.1016/j.marpolbul.2011.12.008

2011

Pawłowska, J., Włodarska-Kowalczuk, M., Zajączkowski, M., Nygård, H., Berge, J. (2011). Seasonal variability of meio- and macrobenthic standing stocks and diversity in an Arctic fjord (Adventfjorden, Spitsbergen). Polar Biology 34: 833-845. https://doi.org/10.1007/s00300-010-0940-7
Szymczak-Żyła, M., Kowalewska, G., & Louda, J. W. (2011). Chlorophyll-a and derivatives in recent sediments as indicators of productivity and depositional conditions. Marine Chemistry, 125(1-4), 39-48. https://doi.org/10.1016/j.marchem.2011.02.002
Filipkowska, A., Kowalewska, G., Pavoni, B., & Łęczyński, L. (2011). Organotin compounds in surface sediments from seaports on the Gulf of Gdańsk (southern Baltic coast). Environmental monitoring and assessment, 182(1), 455-466. https://doi.org/10.1007/s10661-011-1889-x
Szymczak-Żyła, M., Kowalewska, G., & Louda, J. W. (2011). Chloropigments-a in sediments in coastal zone as markers of eutrophication and environmental conditions., ICES CM Documents 2011 (ICES CM 2011/ M:06)
Kowalewska, G., Belzunce-Segarra, M. J., Schubert, B., Heininger, P., & Heise, S. (2011). The role of sediments in coastal monitoring. Chemical marine monitoring—policy framework and analytical trends, 377-395. (Eds: P.Quevauviller, P. Roose, G. Verreet), Water Quality Measurement Series, Wiley, 2011. https://doi.org/10.1002/9781119990826.ch12
Kowalewska, G., Filipkowska, A., Lubecki, L., & Szymczak-Żyła, M. (2011). Organic contaminants in sediments as indicators of pollution–a case study of the Gulf of Gdańsk, ICES CM Documents 2011 (ICES CM 2011/ M:11)

2010

Zajączkowski, M., Szczuciński, W., Plessen, B., Jernas, P. (2010). Benthic foraminifera in Hornsund (Svalbard): Implication on paleoenvironmental reconstructions. Polish Polar Research 31: 349-375.
Lubecki, L., & Kowalewska, G. (2010). Distribution and fate of polycyclic aromatic hydrocarbons (PAHs) in recent sediments from the Gulf of Gdańsk (SE Baltic). Oceanologia, 52(4). http://dx.doi.org/10.5697/oc.52-4.669
Zajączkowski, M., Darecki, M., Szczuciński, W. (2010). Report on the development of the Vistula river plume in the coastal waters of the Gulf of Gdańsk during the May 2010 flood. Oceanologia 52(2): 311-317.
Zajączkowski, M., Nygård, H., Hegseth, E.N., Berge, J. (2010). Vertical flux of particulate matter in an Arctic fjord: the case of lack of the sea-ice cover in Adventfjorden 2006 - 2007. Polar Biology 33: 223-239.